Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rfc4Q99J62 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.15□□□□□ -0.15
Rfc4Q99J62 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm12857-201ENSMUST00000117678 592 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm8343-201ENSMUST00000182705 994 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm9132-201ENSMUST00000210182 832 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm45398-201ENSMUST00000210561 165 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.14□□□□□ -0.15
Rfc4Q99J62 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.14□□□□□ -0.15
Rfc4Q99J62 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gm13809-201ENSMUST00000117921 597 ntBASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.13□□□□□ -0.15
Rfc4Q99J62 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.13□□□□□ -0.15
Rfc4Q99J62 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.13□□□□□ -0.15
Rfc4Q99J62 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gm7593-201ENSMUST00000187246 644 ntBASIC14.13□□□□□ -0.15
Rfc4Q99J62 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rfc4Q99J62 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfc4Q99J62 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms