Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Gm8956-201ENSMUST00000203939 825 ntBASIC14.48□□□□□ -0.09
Col20a1Q923P0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Gm5369-201ENSMUST00000217499 588 ntBASIC14.48□□□□□ -0.09
Col20a1Q923P0 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.48□□□□□ -0.09
Col20a1Q923P0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.48□□□□□ -0.09
Col20a1Q923P0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col20a1Q923P0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Gm13035-201ENSMUST00000117496 342 ntBASIC14.47□□□□□ -0.09
Col20a1Q923P0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.47□□□□□ -0.09
Col20a1Q923P0 Gm25881-201ENSMUST00000157783 103 ntBASIC14.47□□□□□ -0.09
Col20a1Q923P0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Gm807-202ENSMUST00000224929 408 ntBASIC14.47□□□□□ -0.09
Col20a1Q923P0 Spcs1-203ENSMUST00000226374 592 ntBASIC14.47□□□□□ -0.09
Col20a1Q923P0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col20a1Q923P0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm14058-201ENSMUST00000116082 735 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm11941-201ENSMUST00000119904 610 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm42997-202ENSMUST00000200321 985 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.46□□□□□ -0.09
Col20a1Q923P0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col20a1Q923P0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col20a1Q923P0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col20a1Q923P0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.1
Col20a1Q923P0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm9062-201ENSMUST00000117712 727 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.45□□□□□ -0.1
Col20a1Q923P0 Gm22902-201ENSMUST00000158488 302 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms