Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
H1fooQ8VIK3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
H1fooQ8VIK3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.3□□□□□ -0.76
H1fooQ8VIK3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H1fooQ8VIK3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
H1fooQ8VIK3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm13736-201ENSMUST00000119272 253 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm9083-201ENSMUST00000120423 819 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm5370-201ENSMUST00000187187 574 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm18304-201ENSMUST00000189162 546 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm44882-201ENSMUST00000205702 802 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
H1fooQ8VIK3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm12314-201ENSMUST00000118104 538 ntBASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
H1fooQ8VIK3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms