Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.7□□□□□ -0.38
Trim60Q8VI40 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim60Q8VI40 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm11478-201ENSMUST00000117851 599 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm14127-201ENSMUST00000117906 678 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm27682-201ENSMUST00000183930 110 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm18187-201ENSMUST00000196476 984 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm43818-201ENSMUST00000200605 466 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm5035-201ENSMUST00000215581 927 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.69□□□□□ -0.38
Trim60Q8VI40 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim60Q8VI40 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim60Q8VI40 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.68□□□□□ -0.38
Trim60Q8VI40 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.68□□□□□ -0.38
Trim60Q8VI40 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.68□□□□□ -0.38
Trim60Q8VI40 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.68□□□□□ -0.38
Trim60Q8VI40 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim60Q8VI40 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim60Q8VI40 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms