Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpa1Q8VEE4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm42612-201ENSMUST00000197986 623 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm43170-201ENSMUST00000199827 612 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Gm44855-201ENSMUST00000205725 362 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpa1Q8VEE4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpa1Q8VEE4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms