Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.52□□□□□ -0.09
Cchcr1Q8K2I2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Mir1247-201ENSMUST00000116706 82 ntBASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.51□□□□□ -0.09
Cchcr1Q8K2I2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gm14999-201ENSMUST00000121039 624 ntBASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Cchcr1Q8K2I2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm23912-201ENSMUST00000104687 87 ntBASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm13570-201ENSMUST00000140763 309 ntBASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Gm42693-201ENSMUST00000196779 631 ntBASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cchcr1Q8K2I2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms