Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Syne4Q8CII8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gm12628-201ENSMUST00000122193 382 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gm22442-201ENSMUST00000157256 144 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gm28388-201ENSMUST00000186262 437 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gm42657-201ENSMUST00000201746 211 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.85□□□□□ -0.19
Syne4Q8CII8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.85□□□□□ -0.19
Syne4Q8CII8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm13937-201ENSMUST00000121000 988 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm10731-201ENSMUST00000181171 448 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm29499-201ENSMUST00000189151 486 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm28329-201ENSMUST00000191208 689 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm29171-201ENSMUST00000191397 486 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm19091-201ENSMUST00000208120 978 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm6867-201ENSMUST00000219165 425 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm26035-201ENSMUST00000083065 308 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Syne4Q8CII8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Syne4Q8CII8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Syne4Q8CII8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Syne4Q8CII8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Syne4Q8CII8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.83□□□□□ -0.2
Syne4Q8CII8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Syne4Q8CII8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms