Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.09■□□□□ 0.01
Trim52Q8CDV4 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim52Q8CDV4 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.09■□□□□ 0.01
Trim52Q8CDV4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim52Q8CDV4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm12579-201ENSMUST00000118040 783 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm22144-201ENSMUST00000157402 102 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm9540-201ENSMUST00000188230 478 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm44124-201ENSMUST00000204159 472 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 AC122408.1-201ENSMUST00000218949 218 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.08■□□□□ 0
Trim52Q8CDV4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim52Q8CDV4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim52Q8CDV4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm15573-201ENSMUST00000119487 540 ntBASIC15.07■□□□□ 0
Trim52Q8CDV4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm7666-201ENSMUST00000146631 819 ntBASIC15.07■□□□□ 0
Trim52Q8CDV4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trim52Q8CDV4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm44545-201ENSMUST00000208262 746 ntBASIC15.07■□□□□ 0
Trim52Q8CDV4 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.07■□□□□ 0
Trim52Q8CDV4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim52Q8CDV4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim52Q8CDV4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm37348-201ENSMUST00000193104 1789 ntBASIC15.06■□□□□ 0
Trim52Q8CDV4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm38117-201ENSMUST00000194653 939 ntBASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm19287-201ENSMUST00000203190 358 ntBASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.06■□□□□ 0
Trim52Q8CDV4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trim52Q8CDV4 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms