Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gm14644-201ENSMUST00000116671 647 ntBASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gm6963-201ENSMUST00000147879 379 ntBASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccdc60Q8C4J0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Rprl1-201ENSMUST00000158050 327 ntBASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm38317-201ENSMUST00000195564 343 ntBASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccdc60Q8C4J0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Matn2-203ENSMUST00000226766 3252 ntBASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm44967-201ENSMUST00000207047 631 ntBASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccdc60Q8C4J0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc60Q8C4J0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms