Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Cog3-203ENSMUST00000227473 4197 ntBASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trub1Q8C0D0 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.65□□□□□ -0.38
Trub1Q8C0D0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm23912-201ENSMUST00000104687 87 ntBASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trub1Q8C0D0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trub1Q8C0D0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trub1Q8C0D0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms