Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sh3rf2Q8BZT2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm15515-201ENSMUST00000117827 822 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm11450-201ENSMUST00000121144 333 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Mir7677-201ENSMUST00000184226 67 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.44□□□□□ -0.42
Sh3rf2Q8BZT2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm12176-201ENSMUST00000121420 875 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm23699-201ENSMUST00000158835 135 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Mir3547-201ENSMUST00000175461 88 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm43947-201ENSMUST00000203019 959 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm44100-201ENSMUST00000204329 436 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm8959-201ENSMUST00000213150 571 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gm270-201ENSMUST00000223010 976 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Spcs1-203ENSMUST00000226374 592 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sh3rf2Q8BZT2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sh3rf2Q8BZT2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms