Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col16a1Q8BLX7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm43852-201ENSMUST00000202098 917 ntBASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm18204-201ENSMUST00000209835 793 ntBASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm45500-201ENSMUST00000211676 803 ntBASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 AC122346.3-201ENSMUST00000223983 306 ntBASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Gm4604-201ENSMUST00000025040 390 ntBASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col16a1Q8BLX7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm15036-201ENSMUST00000118880 400 ntBASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm12948-201ENSMUST00000119406 682 ntBASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm19587-201ENSMUST00000191395 545 ntBASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col16a1Q8BLX7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm8574-201ENSMUST00000203207 924 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm44056-201ENSMUST00000204623 1427 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col16a1Q8BLX7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms