Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc5a7Q8BGY9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Gm7730-201ENSMUST00000212486 454 ntBASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc5a7Q8BGY9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm6152-201ENSMUST00000151704 340 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Rmrp-201ENSMUST00000157463 271 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Slc5a7Q8BGY9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 154.9 ms