Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm24830-201ENSMUST00000102024 166 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm24934-201ENSMUST00000103764 111 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm2991-201ENSMUST00000173338 480 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm38266-201ENSMUST00000194931 421 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm3961-201ENSMUST00000204425 994 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm30285-201ENSMUST00000214614 422 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm26232-201ENSMUST00000083360 166 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fam53bQ8BGR5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr582-201ENSMUST00000098212 960 ntBASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Fam53bQ8BGR5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms