Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Pck2-205ENSMUST00000226352 2784 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm24830-201ENSMUST00000102024 166 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm15198-201ENSMUST00000117283 177 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm45331-201ENSMUST00000209868 554 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm21769-201ENSMUST00000211922 111 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm8712-201ENSMUST00000221090 701 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gm26232-201ENSMUST00000083360 166 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Atg4bQ8BGE6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gm23270-201ENSMUST00000104055 131 ntBASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gm14726-201ENSMUST00000120623 896 ntBASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gm27390-201ENSMUST00000184516 176 ntBASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gm4034-201ENSMUST00000187674 480 ntBASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Atg4bQ8BGE6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.55□□□□□ -0.56
Atg4bQ8BGE6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms