Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubp1Q811S7 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.18□□□□□ -0.46
Ubp1Q811S7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.17□□□□□ -0.46
Ubp1Q811S7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.17□□□□□ -0.46
Ubp1Q811S7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.17□□□□□ -0.46
Ubp1Q811S7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.17□□□□□ -0.46
Ubp1Q811S7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubp1Q811S7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.17□□□□□ -0.46
Ubp1Q811S7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm38341-201ENSMUST00000195357 515 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm43758-201ENSMUST00000199500 367 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm3961-201ENSMUST00000204425 994 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm5178-201ENSMUST00000219380 898 ntBASIC12.16□□□□□ -0.46
Ubp1Q811S7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ubp1Q811S7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms