Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Prpf38bQ80SY5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm13296-201ENSMUST00000117854 997 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm12502-201ENSMUST00000120197 444 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm13899-201ENSMUST00000121519 1255 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Prpf38bQ80SY5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Prpf38bQ80SY5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms