Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh8Q7TSK3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm13996-201ENSMUST00000118456 430 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm4909-201ENSMUST00000118749 794 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh8Q7TSK3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh8Q7TSK3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.15□□□□□ -0.47
Pcdh8Q7TSK3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh8Q7TSK3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdh8Q7TSK3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh8Q7TSK3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh8Q7TSK3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms