Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.8□□□□□ -0.36
Cspg5Q71M36 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cspg5Q71M36 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm8885-201ENSMUST00000189382 598 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cspg5Q71M36 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm38092-201ENSMUST00000195600 653 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm9555-201ENSMUST00000200908 583 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm18730-201ENSMUST00000218038 343 ntBASIC12.78□□□□□ -0.36
Cspg5Q71M36 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cspg5Q71M36 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cspg5Q71M36 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 119.4 ms