Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gm16166-201ENSMUST00000118291 787 ntBASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gm11836-201ENSMUST00000121022 441 ntBASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gm42657-201ENSMUST00000201746 211 ntBASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx55Q6ZPL9 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm37458-201ENSMUST00000194055 410 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx55Q6ZPL9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm15207-201ENSMUST00000119259 442 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm13937-201ENSMUST00000121000 988 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm22442-201ENSMUST00000157256 144 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm25951-201ENSMUST00000175330 64 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.91□□□□□ -0.18
Ddx55Q6ZPL9 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms