Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup98Q6PFD9 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm44158-201ENSMUST00000203881 505 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm5451-201ENSMUST00000080545 579 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm7940-201ENSMUST00000218195 769 ntBASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup98Q6PFD9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms