Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ShbQ6PD21 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.12□□□□□ -0.31
ShbQ6PD21 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShbQ6PD21 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm11500-201ENSMUST00000118237 601 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm25554-201ENSMUST00000158075 113 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Mir6941-201ENSMUST00000184711 59 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm18801-201ENSMUST00000186616 536 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm28833-201ENSMUST00000189671 559 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm37852-201ENSMUST00000193027 350 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm6450-201ENSMUST00000200896 574 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.11□□□□□ -0.31
ShbQ6PD21 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm10263-201ENSMUST00000085163 300 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ShbQ6PD21 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShbQ6PD21 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ShbQ6PD21 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.11□□□□□ -0.31
ShbQ6PD21 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm12274-201ENSMUST00000120062 385 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.1□□□□□ -0.31
ShbQ6PD21 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm43163-201ENSMUST00000196571 442 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm6423-201ENSMUST00000204315 934 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Gm44882-201ENSMUST00000205702 802 ntBASIC13.1□□□□□ -0.31
ShbQ6PD21 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ShbQ6PD21 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShbQ6PD21 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ShbQ6PD21 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms