Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.4□□□□□ -0.11
Krt40Q6IFX3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm9062-201ENSMUST00000117712 727 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm14724-201ENSMUST00000118400 537 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm11941-201ENSMUST00000119904 610 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm27530-201ENSMUST00000184096 98 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm5733-201ENSMUST00000190232 939 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm3786-201ENSMUST00000202659 378 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt40Q6IFX3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm7851-201ENSMUST00000117574 323 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt40Q6IFX3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm13045-201ENSMUST00000119019 712 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm15004-201ENSMUST00000119192 630 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm8566-201ENSMUST00000120174 465 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm15610-201ENSMUST00000120584 195 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm42997-202ENSMUST00000200321 985 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm9555-201ENSMUST00000200908 583 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm44100-201ENSMUST00000204329 436 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Gm9797-202ENSMUST00000218003 294 ntBASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Krt40Q6IFX3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms