Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.11□□□□□ -0.47
VclQ64727 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.11□□□□□ -0.47
VclQ64727 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.11□□□□□ -0.47
VclQ64727 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VclQ64727 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VclQ64727 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VclQ64727 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.1□□□□□ -0.47
VclQ64727 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
VclQ64727 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
VclQ64727 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.1□□□□□ -0.47
VclQ64727 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.1□□□□□ -0.47
VclQ64727 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.1□□□□□ -0.47
VclQ64727 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.1□□□□□ -0.47
VclQ64727 Gm8712-201ENSMUST00000221090 701 ntBASIC12.1□□□□□ -0.47
VclQ64727 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.1□□□□□ -0.47
VclQ64727 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
VclQ64727 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.1□□□□□ -0.47
VclQ64727 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VclQ64727 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VclQ64727 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VclQ64727 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.09□□□□□ -0.47
VclQ64727 Mir877-201ENSMUST00000104738 85 ntBASIC12.09□□□□□ -0.47
VclQ64727 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.09□□□□□ -0.47
VclQ64727 Gm9083-201ENSMUST00000120423 819 ntBASIC12.09□□□□□ -0.47
VclQ64727 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.09□□□□□ -0.47
VclQ64727 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Gm17376-201ENSMUST00000166016 84 ntBASIC12.09□□□□□ -0.47
VclQ64727 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.09□□□□□ -0.47
VclQ64727 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Gm44651-201ENSMUST00000207343 372 ntBASIC12.09□□□□□ -0.47
VclQ64727 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VclQ64727 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.09□□□□□ -0.47
VclQ64727 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VclQ64727 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VclQ64727 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.09□□□□□ -0.47
VclQ64727 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VclQ64727 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VclQ64727 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms