Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm17208-201ENSMUST00000168388 535 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm4034-201ENSMUST00000187674 480 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm8805-201ENSMUST00000117848 313 ntBASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm37042-201ENSMUST00000193816 581 ntBASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm43575-201ENSMUST00000196420 516 ntBASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav15-1-dv6-1Q5R1D2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms