Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm43852-201ENSMUST00000202098 917 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm12684-201ENSMUST00000118675 999 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm12736-201ENSMUST00000119330 236 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm4462-201ENSMUST00000166453 492 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm5449-201ENSMUST00000081132 357 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.43□□□□□ -0.42
Bdp1Q571C7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm15207-201ENSMUST00000119259 442 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm15004-201ENSMUST00000119192 630 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Bdp1Q571C7 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.42□□□□□ -0.42
Bdp1Q571C7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.41□□□□□ -0.42
Bdp1Q571C7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Gm7627-201ENSMUST00000183205 999 ntBASIC12.41□□□□□ -0.42
Bdp1Q571C7 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Bdp1Q571C7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms