Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn2bQ56A07 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.14□□□□□ -0.47
Scn2bQ56A07 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm27572-201ENSMUST00000183702 255 ntBASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.14□□□□□ -0.47
Scn2bQ56A07 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.14□□□□□ -0.47
Scn2bQ56A07 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Scn2bQ56A07 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm5187-201ENSMUST00000117317 991 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm13315-201ENSMUST00000120376 991 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm23119-201ENSMUST00000158610 140 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm27514-201ENSMUST00000183692 110 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm18304-201ENSMUST00000189162 546 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm45880-201ENSMUST00000213041 853 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm10478-201ENSMUST00000084451 396 ntBASIC12.13□□□□□ -0.47
Scn2bQ56A07 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Scn2bQ56A07 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms