Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Spire1Q52KF3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.52□□□□□ -0.41
Spire1Q52KF3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.52□□□□□ -0.41
Spire1Q52KF3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.52□□□□□ -0.41
Spire1Q52KF3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Spire1Q52KF3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Grk6-205ENSMUST00000224653 2976 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.51□□□□□ -0.41
Spire1Q52KF3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Spire1Q52KF3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.5□□□□□ -0.41
Spire1Q52KF3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm10774-201ENSMUST00000188689 204 ntBASIC12.5□□□□□ -0.41
Spire1Q52KF3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.5□□□□□ -0.41
Spire1Q52KF3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.5□□□□□ -0.41
Spire1Q52KF3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms