Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Gm3786-201ENSMUST00000202659 378 ntBASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rc3h1Q4VGL6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rc3h1Q4VGL6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm12164-201ENSMUST00000121695 551 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm27530-201ENSMUST00000184096 98 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm28071-201ENSMUST00000190355 478 ntBASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rc3h1Q4VGL6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm22133-201ENSMUST00000102082 109 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm15515-201ENSMUST00000117827 822 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm12266-201ENSMUST00000120311 962 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm9630-201ENSMUST00000178304 885 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gm4607-201ENSMUST00000206649 577 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rc3h1Q4VGL6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rc3h1Q4VGL6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms