Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm14460-201ENSMUST00000121511 639 ntBASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upf3aQ3ULJ3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm13888-201ENSMUST00000119148 422 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm10752-201ENSMUST00000218348 729 ntBASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upf3aQ3ULJ3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm8956-201ENSMUST00000203939 825 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gm45550-201ENSMUST00000209380 946 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Upf3aQ3ULJ3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms