Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Gm5714-201ENSMUST00000197343 566 ntBASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Gm5340-201ENSMUST00000203733 880 ntBASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Gm44506-201ENSMUST00000206278 965 ntBASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Gm45527-201ENSMUST00000211052 774 ntBASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sf3b2Q3UJB0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm25766-201ENSMUST00000104101 131 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm22711-201ENSMUST00000116890 133 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm24844-201ENSMUST00000158679 127 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm26134-201ENSMUST00000178484 110 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm18711-201ENSMUST00000199341 750 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 AC153962.2-201ENSMUST00000219417 550 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Gm18499-201ENSMUST00000220808 1021 ntBASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sf3b2Q3UJB0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Gm18706-201ENSMUST00000210053 1066 ntBASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sf3b2Q3UJB0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm13351-201ENSMUST00000118087 414 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm8723-201ENSMUST00000166076 820 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm8701-201ENSMUST00000169259 874 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm45758-201ENSMUST00000212448 1006 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Gm14005-208ENSMUST00000223654 681 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sf3b2Q3UJB0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms