Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Gm9996-201ENSMUST00000070359 913 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf44Q3UHJ8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm12015-201ENSMUST00000117065 843 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf44Q3UHJ8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Rnf44Q3UHJ8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf44Q3UHJ8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm24830-201ENSMUST00000102024 166 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm14644-201ENSMUST00000116671 647 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm17376-201ENSMUST00000166016 84 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 AA914427-201ENSMUST00000193194 1166 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm13097-201ENSMUST00000210722 397 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Gm26232-201ENSMUST00000083360 166 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf44Q3UHJ8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms