Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.88□□□□□ -0.35
Cul4aQ3TCH7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cul4aQ3TCH7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cul4aQ3TCH7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms