Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3KNL4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Q3KNL4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.06□□□□□ -0.48
Q3KNL4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3KNL4 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Q3KNL4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Gm27682-201ENSMUST00000183930 110 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Gm7063-201ENSMUST00000186840 981 ntBASIC12.05□□□□□ -0.48
Q3KNL4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.05□□□□□ -0.48
Q3KNL4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Gm22058-201ENSMUST00000083393 310 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.05□□□□□ -0.48
Q3KNL4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Q3KNL4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.05□□□□□ -0.48
Q3KNL4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Q3KNL4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3KNL4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.04□□□□□ -0.48
Q3KNL4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.04□□□□□ -0.48
Q3KNL4 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Q3KNL4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.04□□□□□ -0.48
Q3KNL4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Q3KNL4 Gm11964-201ENSMUST00000120982 444 ntBASIC12.04□□□□□ -0.48
Q3KNL4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Q3KNL4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.04□□□□□ -0.48
Q3KNL4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.04□□□□□ -0.48
Q3KNL4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Q3KNL4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Q3KNL4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms