Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm45124-201ENSMUST00000206723 2755 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm44086-201ENSMUST00000203251 2349 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm4294-201ENSMUST00000105169 614 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm18119-201ENSMUST00000219972 616 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm22900-201ENSMUST00000104538 130 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm5706-201ENSMUST00000181525 993 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm9409-201ENSMUST00000197017 316 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm7210-201ENSMUST00000209309 1067 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 AC155293.1-201ENSMUST00000219793 1026 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 AC134860.2-201ENSMUST00000225277 1036 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Mir675-201ENSMUST00000102320 84 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm8659-201ENSMUST00000120024 1084 ntBASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Ush2AQ2QI47 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm6024-201ENSMUST00000117850 1558 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm37597-201ENSMUST00000191853 382 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm43664-201ENSMUST00000196038 734 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm43460-201ENSMUST00000202491 1057 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm42467-201ENSMUST00000202954 1447 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 AC159649.2-201ENSMUST00000222984 3223 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 AC154412.1-201ENSMUST00000226540 2786 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm11951-201ENSMUST00000116005 431 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm7516-201ENSMUST00000186198 706 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Gm5845-201ENSMUST00000195812 796 ntBASIC6.26□□□□□ -1.41
Ush2AQ2QI47 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms