Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm12314-201ENSMUST00000118104 538 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm13315-201ENSMUST00000120376 991 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm25261-201ENSMUST00000157416 134 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm27243-201ENSMUST00000183964 521 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm18062-201ENSMUST00000208020 547 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm18055-201ENSMUST00000208254 547 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.36□□□□□ -0.43
Pfdn6Q03958 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn6Q03958 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm6023-201ENSMUST00000118217 606 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm11597-201ENSMUST00000121423 964 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm6222-202ENSMUST00000182143 629 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm44958-201ENSMUST00000203734 736 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm10076-201ENSMUST00000073238 384 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.35□□□□□ -0.43
Pfdn6Q03958 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pfdn6Q03958 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.34□□□□□ -0.43
Pfdn6Q03958 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.34□□□□□ -0.43
Pfdn6Q03958 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms