Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Scn1bP97952 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Scn1bP97952 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scn1bP97952 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Scn1bP97952 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Scn1bP97952 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Scn1bP97952 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm11524-201ENSMUST00000119349 807 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.22□□□□□ -0.61
Scn1bP97952 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.22□□□□□ -0.61
Scn1bP97952 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm24694-201ENSMUST00000180054 110 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Scn1bP97952 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm27663-201ENSMUST00000184839 110 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.22□□□□□ -0.61
Scn1bP97952 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm7730-201ENSMUST00000212486 454 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.22□□□□□ -0.61
Scn1bP97952 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Scn1bP97952 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.22□□□□□ -0.61
Scn1bP97952 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scn1bP97952 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
Scn1bP97952 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Scn1bP97952 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scn1bP97952 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Scn1bP97952 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scn1bP97952 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.21□□□□□ -0.61
Scn1bP97952 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.21□□□□□ -0.61
Scn1bP97952 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.21□□□□□ -0.61
Scn1bP97952 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Gm15376-201ENSMUST00000122258 783 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Scn1bP97952 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.21□□□□□ -0.61
Scn1bP97952 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Gm42550-201ENSMUST00000201553 960 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scn1bP97952 Gm19078-201ENSMUST00000206311 727 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.21□□□□□ -0.61
Scn1bP97952 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.21□□□□□ -0.61
Scn1bP97952 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scn1bP97952 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.21□□□□□ -0.62
Scn1bP97952 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Scn1bP97952 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scn1bP97952 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Scn1bP97952 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms