Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SgcgP82348 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SgcgP82348 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
SgcgP82348 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcgP82348 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
SgcgP82348 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Gm11989-201ENSMUST00000117240 672 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Gm11362-201ENSMUST00000118838 850 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SgcgP82348 Mir5120-201ENSMUST00000175020 78 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Gm37666-201ENSMUST00000194110 866 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Gm19208-201ENSMUST00000213861 912 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.13□□□□□ -0.47
SgcgP82348 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.13□□□□□ -0.47
SgcgP82348 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.13□□□□□ -0.47
SgcgP82348 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SgcgP82348 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Gm25732-201ENSMUST00000175168 60 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Mir6979-201ENSMUST00000183927 56 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.12□□□□□ -0.47
SgcgP82348 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.12□□□□□ -0.47
SgcgP82348 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SgcgP82348 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgcgP82348 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.11□□□□□ -0.47
SgcgP82348 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.11□□□□□ -0.47
SgcgP82348 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SgcgP82348 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcgP82348 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms