Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atf1P81269 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atf1P81269 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Atf1P81269 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atf1P81269 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Atf1P81269 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atf1P81269 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Atf1P81269 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.62□□□□□ -0.71
Atf1P81269 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Atf1P81269 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atf1P81269 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Gm14660-201ENSMUST00000119809 575 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.62□□□□□ -0.71
Atf1P81269 Gm27023-201ENSMUST00000182372 285 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.62□□□□□ -0.71
Atf1P81269 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atf1P81269 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Atf1P81269 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atf1P81269 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Atf1P81269 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Atf1P81269 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.61□□□□□ -0.71
Atf1P81269 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Atf1P81269 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Gm13226-201ENSMUST00000117838 404 ntBASIC10.61□□□□□ -0.71
Atf1P81269 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.61□□□□□ -0.71
Atf1P81269 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.61□□□□□ -0.71
Atf1P81269 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.61□□□□□ -0.71
Atf1P81269 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.61□□□□□ -0.71
Atf1P81269 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atf1P81269 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms