Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Gm22133-201ENSMUST00000102082 109 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Gm7722-201ENSMUST00000120646 741 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Gm17040-202ENSMUST00000170597 889 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Mir3102-201ENSMUST00000175555 104 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Mir6927-201ENSMUST00000184494 71 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.31□□□□□ -0.28
CiitaP79621 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CiitaP79621 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CiitaP79621 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.3□□□□□ -0.28
CiitaP79621 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.3□□□□□ -0.28
CiitaP79621 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Gm15711-201ENSMUST00000118889 535 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.3□□□□□ -0.28
CiitaP79621 AU022133-201ENSMUST00000200601 873 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Gm44124-201ENSMUST00000204159 472 ntBASIC13.3□□□□□ -0.28
CiitaP79621 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.3□□□□□ -0.28
CiitaP79621 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CiitaP79621 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.3□□□□□ -0.28
CiitaP79621 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CiitaP79621 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CiitaP79621 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.3□□□□□ -0.28
CiitaP79621 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.3□□□□□ -0.28
CiitaP79621 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CiitaP79621 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.29□□□□□ -0.28
CiitaP79621 Mir5132-201ENSMUST00000175166 71 ntBASIC13.29□□□□□ -0.28
CiitaP79621 Gm4607-201ENSMUST00000206649 577 ntBASIC13.29□□□□□ -0.28
CiitaP79621 Gm19208-201ENSMUST00000213861 912 ntBASIC13.29□□□□□ -0.28
CiitaP79621 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.29□□□□□ -0.28
CiitaP79621 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CiitaP79621 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CiitaP79621 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CiitaP79621 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CiitaP79621 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CiitaP79621 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms