Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Msx3P70354 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Msx3P70354 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.62□□□□□ -0.39
Msx3P70354 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Msx3P70354 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Msx3P70354 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Msx3P70354 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Msx3P70354 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Msx3P70354 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.61□□□□□ -0.39
Msx3P70354 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Msx3P70354 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Msx3P70354 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.61□□□□□ -0.39
Msx3P70354 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.61□□□□□ -0.39
Msx3P70354 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Msx3P70354 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Msx3P70354 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Msx3P70354 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Msx3P70354 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.6□□□□□ -0.39
Msx3P70354 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.6□□□□□ -0.39
Msx3P70354 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.6□□□□□ -0.39
Msx3P70354 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.6□□□□□ -0.39
Msx3P70354 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Msx3P70354 Gm5187-201ENSMUST00000117317 991 ntBASIC12.6□□□□□ -0.39
Msx3P70354 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Gm28882-201ENSMUST00000185504 314 ntBASIC12.6□□□□□ -0.39
Msx3P70354 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.6□□□□□ -0.39
Msx3P70354 Gm38002-201ENSMUST00000193255 180 ntBASIC12.6□□□□□ -0.39
Msx3P70354 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Msx3P70354 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.6□□□□□ -0.39
Msx3P70354 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Msx3P70354 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Msx3P70354 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms