Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.27□□□□□ -0.77
Pdlim4P70271 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Pdlim4P70271 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm43438-201ENSMUST00000198133 379 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm6007-201ENSMUST00000208170 823 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.26□□□□□ -0.77
Pdlim4P70271 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.26□□□□□ -0.77
Pdlim4P70271 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pdlim4P70271 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm12058-201ENSMUST00000118614 437 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm13297-201ENSMUST00000120205 934 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.25□□□□□ -0.77
Pdlim4P70271 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm27516-201ENSMUST00000184237 98 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm37201-201ENSMUST00000191845 523 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Morn2-202ENSMUST00000227729 656 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm26035-201ENSMUST00000083065 308 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.25□□□□□ -0.77
Pdlim4P70271 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.25□□□□□ -0.77
Pdlim4P70271 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pdlim4P70271 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms