Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm9996-201ENSMUST00000070359 913 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Gm26232-201ENSMUST00000083360 166 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.61□□□□□ -0.55
Nup43P59235 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nup43P59235 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nup43P59235 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nup43P59235 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Nup43P59235 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.6□□□□□ -0.55
Nup43P59235 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.6□□□□□ -0.55
Nup43P59235 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.6□□□□□ -0.55
Nup43P59235 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm7584-201ENSMUST00000175829 940 ntBASIC11.6□□□□□ -0.55
Nup43P59235 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nup43P59235 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Nup43P59235 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.6□□□□□ -0.55
Nup43P59235 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.6□□□□□ -0.55
Nup43P59235 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nup43P59235 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nup43P59235 Gm22323-201ENSMUST00000103832 109 ntBASIC11.59□□□□□ -0.55
Nup43P59235 Gm14109-201ENSMUST00000118814 309 ntBASIC11.59□□□□□ -0.55
Nup43P59235 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Gm37259-201ENSMUST00000193903 849 ntBASIC11.59□□□□□ -0.55
Nup43P59235 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.59□□□□□ -0.55
Nup43P59235 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.59□□□□□ -0.55
Nup43P59235 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.59□□□□□ -0.55
Nup43P59235 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nup43P59235 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nup43P59235 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Nup43P59235 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nup43P59235 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nup43P59235 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nup43P59235 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nup43P59235 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms