Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.69□□□□□ -0.22
Tpm1P58771 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tpm1P58771 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tpm1P58771 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tpm1P58771 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Tpm1P58771 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tpm1P58771 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.68□□□□□ -0.22
Tpm1P58771 Gm11637-201ENSMUST00000120601 592 ntBASIC13.68□□□□□ -0.22
Tpm1P58771 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.68□□□□□ -0.22
Tpm1P58771 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.68□□□□□ -0.22
Tpm1P58771 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tpm1P58771 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tpm1P58771 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tpm1P58771 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tpm1P58771 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.67□□□□□ -0.22
Tpm1P58771 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gm16479-201ENSMUST00000121706 932 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gm2231-201ENSMUST00000125661 612 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.67□□□□□ -0.22
Tpm1P58771 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.67□□□□□ -0.22
Tpm1P58771 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tpm1P58771 Gm2495-201ENSMUST00000191160 466 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gm37042-201ENSMUST00000193816 581 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.67□□□□□ -0.22
Tpm1P58771 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.67□□□□□ -0.22
Tpm1P58771 Gm15823-201ENSMUST00000064305 670 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.67□□□□□ -0.22
Tpm1P58771 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tpm1P58771 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.66□□□□□ -0.22
Tpm1P58771 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Tpm1P58771 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Tpm1P58771 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Gm24231-201ENSMUST00000104315 133 ntBASIC13.66□□□□□ -0.22
Tpm1P58771 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.66□□□□□ -0.22
Tpm1P58771 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Gm8213-201ENSMUST00000118191 441 ntBASIC13.66□□□□□ -0.22
Tpm1P58771 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Tpm1P58771 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Tpm1P58771 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.66□□□□□ -0.22
Tpm1P58771 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.66□□□□□ -0.22
Tpm1P58771 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tpm1P58771 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms