Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Mmp20P57748 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Mmp20P57748 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Mmp20P57748 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Gm28324-201ENSMUST00000187913 264 ntBASIC14□□□□□ -0.17
Mmp20P57748 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Gm37299-201ENSMUST00000193951 826 ntBASIC14□□□□□ -0.17
Mmp20P57748 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14□□□□□ -0.17
Mmp20P57748 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Mmp20P57748 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14□□□□□ -0.17
Mmp20P57748 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp20P57748 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14□□□□□ -0.17
Mmp20P57748 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.99□□□□□ -0.17
Mmp20P57748 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Gm11949-201ENSMUST00000117640 372 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm11451-201ENSMUST00000118946 630 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm15004-201ENSMUST00000119192 630 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm11675-201ENSMUST00000121873 832 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm8737-201ENSMUST00000122208 642 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Mir1901-201ENSMUST00000122616 78 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm8815-201ENSMUST00000173809 620 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm25072-201ENSMUST00000175233 235 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.99□□□□□ -0.17
Mmp20P57748 Gm43186-201ENSMUST00000198130 824 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm18893-201ENSMUST00000198416 943 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.99□□□□□ -0.17
Mmp20P57748 Gm44882-201ENSMUST00000205702 802 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.99□□□□□ -0.17
Mmp20P57748 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Mmp20P57748 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Mmp20P57748 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.99□□□□□ -0.17
Mmp20P57748 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.99□□□□□ -0.17
Mmp20P57748 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp20P57748 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Mmp20P57748 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Mmp20P57748 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Mmp20P57748 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp20P57748 Gm14193-201ENSMUST00000105067 153 ntBASIC13.98□□□□□ -0.17
Mmp20P57748 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp20P57748 Gm13916-201ENSMUST00000117368 628 ntBASIC13.98□□□□□ -0.17
Mmp20P57748 Gm12579-201ENSMUST00000118040 783 ntBASIC13.98□□□□□ -0.17
Mmp20P57748 Gm8731-201ENSMUST00000118088 412 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms