Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm10146-201ENSMUST00000072739 309 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm2423-201ENSMUST00000074863 733 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Sssca1P56873 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.92□□□□□ -0.82
Sssca1P56873 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sssca1P56873 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Sssca1P56873 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Sssca1P56873 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm11803-201ENSMUST00000119966 444 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Sssca1P56873 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.91□□□□□ -0.82
Sssca1P56873 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.91□□□□□ -0.82
Sssca1P56873 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm19163-201ENSMUST00000223313 780 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 Gm24136-201ENSMUST00000083374 165 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sssca1P56873 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sssca1P56873 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.91□□□□□ -0.82
Sssca1P56873 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sssca1P56873 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.9□□□□□ -0.82
Sssca1P56873 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sssca1P56873 Gm27331-201ENSMUST00000183705 60 ntBASIC9.9□□□□□ -0.82
Sssca1P56873 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sssca1P56873 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms