Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Lim2P56563 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lim2P56563 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Lim2P56563 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.28□□□□□ -0.44
Lim2P56563 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Lim2P56563 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lim2P56563 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lim2P56563 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Lim2P56563 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Lim2P56563 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lim2P56563 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.27□□□□□ -0.45
Lim2P56563 Gm14109-201ENSMUST00000118814 309 ntBASIC12.27□□□□□ -0.45
Lim2P56563 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.27□□□□□ -0.45
Lim2P56563 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.27□□□□□ -0.45
Lim2P56563 Gm44958-201ENSMUST00000203734 736 ntBASIC12.27□□□□□ -0.45
Lim2P56563 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.27□□□□□ -0.45
Lim2P56563 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Lim2P56563 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Gm9257-201ENSMUST00000221254 232 ntBASIC12.27□□□□□ -0.45
Lim2P56563 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lim2P56563 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Lim2P56563 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lim2P56563 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.26□□□□□ -0.45
Lim2P56563 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Lim2P56563 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.26□□□□□ -0.45
Lim2P56563 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.26□□□□□ -0.45
Lim2P56563 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.26□□□□□ -0.45
Lim2P56563 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.26□□□□□ -0.45
Lim2P56563 Gm10312-201ENSMUST00000078515 489 ntBASIC12.26□□□□□ -0.45
Lim2P56563 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Lim2P56563 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Lim2P56563 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Map1b-203ENSMUST00000223725 2669 ntBASIC12.26□□□□□ -0.45
Lim2P56563 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.26□□□□□ -0.45
Lim2P56563 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lim2P56563 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms