Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.3□□□□□ -0.12
Cacnb3P54285 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cacnb3P54285 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cacnb3P54285 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Cacnb3P54285 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cacnb3P54285 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Cacnb3P54285 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.3□□□□□ -0.12
Cacnb3P54285 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cacnb3P54285 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.29□□□□□ -0.12
Cacnb3P54285 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.29□□□□□ -0.12
Cacnb3P54285 Gm13809-201ENSMUST00000117921 597 ntBASIC14.29□□□□□ -0.12
Cacnb3P54285 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cacnb3P54285 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.29□□□□□ -0.12
Cacnb3P54285 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.29□□□□□ -0.12
Cacnb3P54285 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cacnb3P54285 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Cacnb3P54285 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cacnb3P54285 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cacnb3P54285 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cacnb3P54285 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm14724-201ENSMUST00000118400 537 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm14460-201ENSMUST00000121511 639 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm9132-201ENSMUST00000210182 832 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cacnb3P54285 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cacnb3P54285 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.28□□□□□ -0.12
Cacnb3P54285 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms