Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.92□□□□□ -0.34
SftpdP50404 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.92□□□□□ -0.34
SftpdP50404 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.92□□□□□ -0.34
SftpdP50404 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Gm3096-201ENSMUST00000185770 364 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Gm43758-201ENSMUST00000199500 367 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.92□□□□□ -0.34
SftpdP50404 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Gm10312-201ENSMUST00000078515 489 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.92□□□□□ -0.34
SftpdP50404 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
SftpdP50404 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.92□□□□□ -0.34
SftpdP50404 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SftpdP50404 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.91□□□□□ -0.34
SftpdP50404 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SftpdP50404 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.91□□□□□ -0.34
SftpdP50404 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.91□□□□□ -0.34
SftpdP50404 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.91□□□□□ -0.34
SftpdP50404 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
SftpdP50404 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.91□□□□□ -0.34
SftpdP50404 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.91□□□□□ -0.34
SftpdP50404 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SftpdP50404 Olfr582-201ENSMUST00000098212 960 ntBASIC12.91□□□□□ -0.34
SftpdP50404 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
SftpdP50404 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
SftpdP50404 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SftpdP50404 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SftpdP50404 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SftpdP50404 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SftpdP50404 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SftpdP50404 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SftpdP50404 Gm23912-201ENSMUST00000104687 87 ntBASIC12.9□□□□□ -0.34
SftpdP50404 Gm11930-201ENSMUST00000117788 190 ntBASIC12.9□□□□□ -0.34
SftpdP50404 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms