Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LtbrP50284 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LtbrP50284 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LtbrP50284 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.54□□□□□ -0.08
LtbrP50284 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LtbrP50284 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm11892-201ENSMUST00000117711 1202 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.53□□□□□ -0.08
LtbrP50284 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.53□□□□□ -0.08
LtbrP50284 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LtbrP50284 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Gm37017-201ENSMUST00000195266 747 ntBASIC14.53□□□□□ -0.08
LtbrP50284 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm44683-201ENSMUST00000209088 484 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Gm9132-201ENSMUST00000210182 832 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.53□□□□□ -0.08
LtbrP50284 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.53□□□□□ -0.08
LtbrP50284 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LtbrP50284 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LtbrP50284 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.52□□□□□ -0.08
LtbrP50284 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LtbrP50284 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.52□□□□□ -0.08
LtbrP50284 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.52□□□□□ -0.08
LtbrP50284 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.52□□□□□ -0.08
LtbrP50284 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.52□□□□□ -0.08
LtbrP50284 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LtbrP50284 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Gm15171-201ENSMUST00000122191 334 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.52□□□□□ -0.09
LtbrP50284 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.52□□□□□ -0.09
LtbrP50284 Prl7a1-203ENSMUST00000224852 1283 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LtbrP50284 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LtbrP50284 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.52□□□□□ -0.09
LtbrP50284 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.52□□□□□ -0.09
LtbrP50284 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LtbrP50284 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LtbrP50284 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms